Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL2A1P02458 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL2A1P02458 AC121338.2-201ENST00000622535 1744 ntBASIC23.86■■□□□ 1.41
COL2A1P02458 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL2A1P02458 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL2A1P02458 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
COL2A1P02458 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL2A1P02458 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
COL2A1P02458 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL2A1P02458 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.86■■□□□ 1.41
COL2A1P02458 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL2A1P02458 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
COL2A1P02458 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 TSPY7P-201ENST00000431358 1114 ntBASIC23.85■■□□□ 1.41
COL2A1P02458 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.85■■□□□ 1.41
COL2A1P02458 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.85■■□□□ 1.41
COL2A1P02458 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.85■■□□□ 1.41
COL2A1P02458 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.85■■□□□ 1.41
COL2A1P02458 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
COL2A1P02458 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.85■■□□□ 1.41
COL2A1P02458 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL2A1P02458 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.84■■□□□ 1.41
COL2A1P02458 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.84■■□□□ 1.41
COL2A1P02458 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.84■■□□□ 1.41
COL2A1P02458 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
COL2A1P02458 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
COL2A1P02458 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.84■■□□□ 1.41
COL2A1P02458 MIR4785-201ENST00000585005 73 ntBASIC23.84■■□□□ 1.41
COL2A1P02458 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
COL2A1P02458 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL2A1P02458 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL2A1P02458 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
COL2A1P02458 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.83■■□□□ 1.41
COL2A1P02458 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL2A1P02458 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
COL2A1P02458 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL2A1P02458 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
COL2A1P02458 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
COL2A1P02458 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.83■■□□□ 1.41
COL2A1P02458 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.83■■□□□ 1.41
COL2A1P02458 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL2A1P02458 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.83■■□□□ 1.41
COL2A1P02458 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.83■■□□□ 1.41
COL2A1P02458 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.83■■□□□ 1.41
COL2A1P02458 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.83■■□□□ 1.41
COL2A1P02458 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL2A1P02458 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL2A1P02458 AC124283.5-201ENST00000624661 1809 ntBASIC23.83■■□□□ 1.41
COL2A1P02458 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.83■■□□□ 1.41
COL2A1P02458 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL2A1P02458 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.83■■□□□ 1.41
COL2A1P02458 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.82■■□□□ 1.4
COL2A1P02458 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL2A1P02458 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL2A1P02458 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL2A1P02458 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL2A1P02458 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
COL2A1P02458 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.82■■□□□ 1.4
COL2A1P02458 KRT16P5-201ENST00000455284 522 ntBASIC23.82■■□□□ 1.4
COL2A1P02458 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.82■■□□□ 1.4
COL2A1P02458 BX088651.1-201ENST00000540551 451 ntBASIC23.82■■□□□ 1.4
COL2A1P02458 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
COL2A1P02458 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.82■■□□□ 1.4
COL2A1P02458 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.82■■□□□ 1.4
COL2A1P02458 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
COL2A1P02458 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.82■■□□□ 1.4
COL2A1P02458 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL2A1P02458 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.82■■□□□ 1.4
COL2A1P02458 EP400NL-214ENST00000641289 2402 ntBASIC23.81■■□□□ 1.4
COL2A1P02458 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.81■■□□□ 1.4
COL2A1P02458 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL2A1P02458 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.81■■□□□ 1.4
COL2A1P02458 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL2A1P02458 AL031963.3-201ENST00000606441 850 ntBASIC23.81■■□□□ 1.4
COL2A1P02458 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms