Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A1P02452 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.58■■□□□ 1.53
COL1A1P02452 MTDHP1-201ENST00000605323 784 ntBASIC24.58■■□□□ 1.53
COL1A1P02452 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A1P02452 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A1P02452 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
COL1A1P02452 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A1P02452 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
COL1A1P02452 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A1P02452 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A1P02452 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.58■■□□□ 1.53
COL1A1P02452 AL121603.2-201ENST00000557373 2117 ntBASIC24.58■■□□□ 1.53
COL1A1P02452 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.58■■□□□ 1.52
COL1A1P02452 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
COL1A1P02452 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
COL1A1P02452 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
COL1A1P02452 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A1P02452 AC121338.2-201ENST00000622535 1744 ntBASIC24.57■■□□□ 1.52
COL1A1P02452 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A1P02452 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A1P02452 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A1P02452 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
COL1A1P02452 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A1P02452 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
COL1A1P02452 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A1P02452 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A1P02452 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A1P02452 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
COL1A1P02452 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
COL1A1P02452 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.57■■□□□ 1.52
COL1A1P02452 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A1P02452 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A1P02452 PTBP1P-201ENST00000554374 1601 ntBASIC24.57■■□□□ 1.52
COL1A1P02452 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.56■■□□□ 1.52
COL1A1P02452 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.56■■□□□ 1.52
COL1A1P02452 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.56■■□□□ 1.52
COL1A1P02452 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.56■■□□□ 1.52
COL1A1P02452 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
COL1A1P02452 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.56■■□□□ 1.52
COL1A1P02452 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
COL1A1P02452 AC133681.1-201ENST00000465482 601 ntBASIC24.56■■□□□ 1.52
COL1A1P02452 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
COL1A1P02452 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.56■■□□□ 1.52
COL1A1P02452 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A1P02452 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.55■■□□□ 1.52
COL1A1P02452 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.55■■□□□ 1.52
COL1A1P02452 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.55■■□□□ 1.52
COL1A1P02452 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.55■■□□□ 1.52
COL1A1P02452 BX088651.1-201ENST00000540551 451 ntBASIC24.55■■□□□ 1.52
COL1A1P02452 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A1P02452 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.55■■□□□ 1.52
COL1A1P02452 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
COL1A1P02452 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A1P02452 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.54■■□□□ 1.52
COL1A1P02452 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
COL1A1P02452 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A1P02452 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.54■■□□□ 1.52
COL1A1P02452 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A1P02452 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A1P02452 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A1P02452 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.54■■□□□ 1.52
COL1A1P02452 AC124283.5-201ENST00000624661 1809 ntBASIC24.54■■□□□ 1.52
COL1A1P02452 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A1P02452 RPS2P55-201ENST00000397318 883 ntBASIC24.53■■□□□ 1.52
COL1A1P02452 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A1P02452 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.53■■□□□ 1.52
COL1A1P02452 AC107956.1-201ENST00000494359 873 ntBASIC24.53■■□□□ 1.52
COL1A1P02452 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.53■■□□□ 1.52
COL1A1P02452 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.53■■□□□ 1.52
COL1A1P02452 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.53■■□□□ 1.52
COL1A1P02452 AC124016.1-201ENST00000609552 612 ntBASIC24.53■■□□□ 1.52
COL1A1P02452 AC120498.8-201ENST00000614275 531 ntBASIC24.53■■□□□ 1.52
COL1A1P02452 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A1P02452 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.53■■□□□ 1.52
COL1A1P02452 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
COL1A1P02452 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC24.52■■□□□ 1.52
COL1A1P02452 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.52■■□□□ 1.52
COL1A1P02452 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.52■■□□□ 1.52
COL1A1P02452 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A1P02452 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.52■■□□□ 1.51
COL1A1P02452 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.51■■□□□ 1.51
COL1A1P02452 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A1P02452 AC211429.1-201ENST00000415277 523 ntBASIC24.51■■□□□ 1.51
COL1A1P02452 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.51■■□□□ 1.51
COL1A1P02452 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.51■■□□□ 1.51
COL1A1P02452 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
COL1A1P02452 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.51■■□□□ 1.51
COL1A1P02452 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms