Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 ZNRF2P3-201ENST00000424200 374 ntBASIC18.16■□□□□ 0.5
HLA-DQA2P01906 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DQA2P01906 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 AC112907.3-201ENST00000577781 2400 ntBASIC18.15■□□□□ 0.5
HLA-DQA2P01906 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
HLA-DQA2P01906 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 KRT19P1-201ENST00000405746 1186 ntBASIC18.14■□□□□ 0.49
HLA-DQA2P01906 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HLA-DQA2P01906 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DQA2P01906 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DQA2P01906 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms