Protein–RNA interactions for Protein: P01601

IGKV1D-16, Immunoglobulin kappa variable 1D-16 (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-16P01601 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 AC090192.1-201ENST00000517740 490 ntBASIC18.69■□□□□ 0.58
IGKV1D-16P01601 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 AL121832.2-201ENST00000610979 668 ntBASIC18.69■□□□□ 0.58
IGKV1D-16P01601 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 DPP3P2-201ENST00000416030 1696 ntBASIC18.69■□□□□ 0.58
IGKV1D-16P01601 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-16P01601 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 NCF1B-203ENST00000435988 1254 ntBASIC18.68■□□□□ 0.58
IGKV1D-16P01601 GUSBP6-202ENST00000438529 1198 ntBASIC18.68■□□□□ 0.58
IGKV1D-16P01601 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 AL391422.3-201ENST00000603791 2761 ntBASIC18.68■□□□□ 0.58
IGKV1D-16P01601 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-16P01601 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.67■□□□□ 0.58
IGKV1D-16P01601 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-16P01601 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 BX276092.2-201ENST00000417668 665 ntBASIC18.66■□□□□ 0.58
IGKV1D-16P01601 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-16P01601 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 AL589743.5-201ENST00000616611 1050 ntBASIC18.65■□□□□ 0.58
IGKV1D-16P01601 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGKV1D-16P01601 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms