Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.15■□□□□ 0.82
S1PR4O95977 PGM5P4-201ENST00000421970 445 ntBASIC20.15■□□□□ 0.82
S1PR4O95977 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.15■□□□□ 0.82
S1PR4O95977 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.15■□□□□ 0.82
S1PR4O95977 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.15■□□□□ 0.82
S1PR4O95977 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.15■□□□□ 0.82
S1PR4O95977 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
S1PR4O95977 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 AC231657.2-201ENST00000624556 255 ntBASIC20.15■□□□□ 0.82
S1PR4O95977 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.15■□□□□ 0.82
S1PR4O95977 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
S1PR4O95977 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.15■□□□□ 0.82
S1PR4O95977 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 PCDHAC2-203ENST00000615316 3011 ntBASIC20.15■□□□□ 0.82
S1PR4O95977 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.15■□□□□ 0.82
S1PR4O95977 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR4O95977 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
S1PR4O95977 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
S1PR4O95977 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
S1PR4O95977 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
S1PR4O95977 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR4O95977 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR4O95977 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR4O95977 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.14■□□□□ 0.81
S1PR4O95977 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.14■□□□□ 0.81
S1PR4O95977 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
S1PR4O95977 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 DPP3P2-201ENST00000416030 1696 ntBASIC20.13■□□□□ 0.81
S1PR4O95977 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.13■□□□□ 0.81
S1PR4O95977 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 CDCA4P2-201ENST00000441182 718 ntBASIC20.13■□□□□ 0.81
S1PR4O95977 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR4O95977 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.13■□□□□ 0.81
S1PR4O95977 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 AC100791.3-201ENST00000617619 330 ntBASIC20.13■□□□□ 0.81
S1PR4O95977 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.13■□□□□ 0.81
S1PR4O95977 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.13■□□□□ 0.81
S1PR4O95977 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
S1PR4O95977 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.12■□□□□ 0.81
S1PR4O95977 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR4O95977 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
S1PR4O95977 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
S1PR4O95977 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.12■□□□□ 0.81
S1PR4O95977 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR4O95977 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR4O95977 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
S1PR4O95977 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR4O95977 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.12■□□□□ 0.81
S1PR4O95977 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
S1PR4O95977 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.12■□□□□ 0.81
S1PR4O95977 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR4O95977 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR4O95977 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.12■□□□□ 0.81
S1PR4O95977 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
S1PR4O95977 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
S1PR4O95977 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.11■□□□□ 0.81
S1PR4O95977 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 MCRIP2P1-201ENST00000394346 511 ntBASIC20.11■□□□□ 0.81
S1PR4O95977 AC026185.1-201ENST00000445748 174 ntBASIC20.11■□□□□ 0.81
S1PR4O95977 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.11■□□□□ 0.81
S1PR4O95977 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.11■□□□□ 0.81
S1PR4O95977 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
S1PR4O95977 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.11■□□□□ 0.81
S1PR4O95977 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
S1PR4O95977 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
S1PR4O95977 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
S1PR4O95977 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
S1PR4O95977 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms