Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SLC43A1O75387 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC43A1O75387 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC43A1O75387 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC43A1O75387 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SLC43A1O75387 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC43A1O75387 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC43A1O75387 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SLC43A1O75387 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SLC43A1O75387 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC43A1O75387 AC091799.1-201ENST00000422823 811 ntBASIC18.32■□□□□ 0.52
SLC43A1O75387 CDV3P1-201ENST00000471403 739 ntBASIC18.32■□□□□ 0.52
SLC43A1O75387 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC43A1O75387 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC43A1O75387 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC43A1O75387 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC43A1O75387 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC43A1O75387 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 AC116050.2-201ENST00000612102 1779 ntBASIC18.32■□□□□ 0.52
SLC43A1O75387 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC43A1O75387 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC43A1O75387 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC43A1O75387 AC073314.1-201ENST00000568729 2216 ntBASIC18.31■□□□□ 0.52
SLC43A1O75387 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC43A1O75387 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC43A1O75387 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC43A1O75387 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC43A1O75387 AC004911.1-201ENST00000416316 871 ntBASIC18.31■□□□□ 0.52
SLC43A1O75387 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC43A1O75387 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC43A1O75387 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC43A1O75387 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC43A1O75387 AC092437.1-201ENST00000624794 1048 ntBASIC18.31■□□□□ 0.52
SLC43A1O75387 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC43A1O75387 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC43A1O75387 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC43A1O75387 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC43A1O75387 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC43A1O75387 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 AC011484.1-201ENST00000377652 1995 ntBASIC18.3■□□□□ 0.52
SLC43A1O75387 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC43A1O75387 AC007322.4-201ENST00000509611 723 ntBASIC18.3■□□□□ 0.52
SLC43A1O75387 DUX4L16-201ENST00000555130 1264 ntBASIC18.3■□□□□ 0.52
SLC43A1O75387 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 AL591742.1-201ENST00000604433 565 ntBASIC18.3■□□□□ 0.52
SLC43A1O75387 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SLC43A1O75387 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC43A1O75387 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SLC43A1O75387 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC43A1O75387 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC43A1O75387 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC43A1O75387 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC43A1O75387 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SLC43A1O75387 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SLC43A1O75387 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC43A1O75387 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC43A1O75387 AC007322.3-201ENST00000426526 701 ntBASIC18.29■□□□□ 0.52
SLC43A1O75387 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC43A1O75387 AC231657.2-201ENST00000624556 255 ntBASIC18.29■□□□□ 0.52
SLC43A1O75387 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SLC43A1O75387 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SLC43A1O75387 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SLC43A1O75387 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms