Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE3O75131 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE3O75131 AL391422.3-201ENST00000603791 2761 ntBASIC19.42■□□□□ 0.7
CPNE3O75131 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE3O75131 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE3O75131 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE3O75131 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CPNE3O75131 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE3O75131 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE3O75131 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE3O75131 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPNE3O75131 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE3O75131 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE3O75131 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE3O75131 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPNE3O75131 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.41■□□□□ 0.7
CPNE3O75131 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 GCSHP5-201ENST00000443090 522 ntBASIC19.41■□□□□ 0.7
CPNE3O75131 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CPNE3O75131 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.41■□□□□ 0.7
CPNE3O75131 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPNE3O75131 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE3O75131 AC073648.6-201ENST00000641589 218 ntBASIC19.41■□□□□ 0.7
CPNE3O75131 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CPNE3O75131 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CPNE3O75131 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CPNE3O75131 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE3O75131 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE3O75131 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE3O75131 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CPNE3O75131 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.4■□□□□ 0.7
CPNE3O75131 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.4■□□□□ 0.7
CPNE3O75131 RPS2P52-201ENST00000469610 820 ntBASIC19.4■□□□□ 0.7
CPNE3O75131 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE3O75131 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.4■□□□□ 0.7
CPNE3O75131 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.4■□□□□ 0.7
CPNE3O75131 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CPNE3O75131 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.4■□□□□ 0.7
CPNE3O75131 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CPNE3O75131 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPNE3O75131 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CPNE3O75131 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPNE3O75131 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPNE3O75131 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CPNE3O75131 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE3O75131 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE3O75131 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE3O75131 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE3O75131 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE3O75131 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.39■□□□□ 0.69
CPNE3O75131 UNC93B4-201ENST00000505679 747 ntBASIC19.39■□□□□ 0.69
CPNE3O75131 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE3O75131 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.39■□□□□ 0.69
CPNE3O75131 AP006294.2-201ENST00000641667 209 ntBASIC19.39■□□□□ 0.69
CPNE3O75131 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE3O75131 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE3O75131 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE3O75131 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.39■□□□□ 0.69
CPNE3O75131 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.39■□□□□ 0.69
CPNE3O75131 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE3O75131 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE3O75131 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPNE3O75131 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 AL158047.1-201ENST00000445918 881 ntBASIC19.38■□□□□ 0.69
CPNE3O75131 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.38■□□□□ 0.69
CPNE3O75131 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPNE3O75131 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms