Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTNSO60931 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.01■□□□□ 0.63
CTNSO60931 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.01■□□□□ 0.63
CTNSO60931 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.01■□□□□ 0.63
CTNSO60931 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTNSO60931 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTNSO60931 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CTNSO60931 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.01■□□□□ 0.63
CTNSO60931 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.01■□□□□ 0.63
CTNSO60931 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.01■□□□□ 0.63
CTNSO60931 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19■□□□□ 0.63
CTNSO60931 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19■□□□□ 0.63
CTNSO60931 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CTNSO60931 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19■□□□□ 0.63
CTNSO60931 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CTNSO60931 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTNSO60931 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19■□□□□ 0.63
CTNSO60931 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19■□□□□ 0.63
CTNSO60931 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CTNSO60931 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTNSO60931 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNSO60931 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19■□□□□ 0.63
CTNSO60931 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19■□□□□ 0.63
CTNSO60931 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNSO60931 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.99■□□□□ 0.63
CTNSO60931 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNSO60931 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNSO60931 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNSO60931 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNSO60931 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNSO60931 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CTNSO60931 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CTNSO60931 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNSO60931 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNSO60931 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNSO60931 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNSO60931 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTNSO60931 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CTNSO60931 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNSO60931 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.98■□□□□ 0.63
CTNSO60931 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNSO60931 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNSO60931 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNSO60931 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CTNSO60931 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CTNSO60931 FEM1AP1-201ENST00000431297 1995 ntBASIC18.97■□□□□ 0.63
CTNSO60931 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.97■□□□□ 0.63
CTNSO60931 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNSO60931 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNSO60931 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNSO60931 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNSO60931 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CTNSO60931 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNSO60931 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNSO60931 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTNSO60931 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNSO60931 AC020907.5-201ENST00000624372 1936 ntBASIC18.96■□□□□ 0.63
CTNSO60931 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNSO60931 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNSO60931 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms