Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.13■□□□□ 0.01
SH2D1AO60880 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.13■□□□□ 0.01
SH2D1AO60880 AC008175.2-201ENST00000612840 297 ntBASIC15.13■□□□□ 0.01
SH2D1AO60880 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SH2D1AO60880 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D1AO60880 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SH2D1AO60880 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SH2D1AO60880 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 TSPY26P-201ENST00000476365 1326 ntBASIC15.13■□□□□ 0.01
SH2D1AO60880 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D1AO60880 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.12■□□□□ 0.01
SH2D1AO60880 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.12■□□□□ 0.01
SH2D1AO60880 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 UNC93B3-201ENST00000308076 687 ntBASIC15.12■□□□□ 0.01
SH2D1AO60880 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 MIR2861-201ENST00000636310 90 ntBASIC15.12■□□□□ 0.01
SH2D1AO60880 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.12■□□□□ 0.01
SH2D1AO60880 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.12■□□□□ 0.01
SH2D1AO60880 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D1AO60880 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SH2D1AO60880 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SH2D1AO60880 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SH2D1AO60880 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 POU5F1P4-201ENST00000413175 1085 ntBASIC15.11■□□□□ 0.01
SH2D1AO60880 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.11■□□□□ 0.01
SH2D1AO60880 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.11■□□□□ 0.01
SH2D1AO60880 AC008764.7-201ENST00000593779 1081 ntBASIC15.11■□□□□ 0.01
SH2D1AO60880 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.11■□□□□ 0.01
SH2D1AO60880 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SH2D1AO60880 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SH2D1AO60880 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SH2D1AO60880 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.11■□□□□ 0.01
SH2D1AO60880 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.11■□□□□ 0.01
SH2D1AO60880 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.1■□□□□ 0.01
SH2D1AO60880 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.1■□□□□ 0.01
SH2D1AO60880 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SH2D1AO60880 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 AL136116.3-201ENST00000402907 1138 ntBASIC15.1■□□□□ 0.01
SH2D1AO60880 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.1■□□□□ 0.01
SH2D1AO60880 AC245052.3-201ENST00000450182 901 ntBASIC15.1■□□□□ 0.01
SH2D1AO60880 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.1■□□□□ 0.01
SH2D1AO60880 AC024257.2-201ENST00000549699 147 ntBASIC15.1■□□□□ 0.01
SH2D1AO60880 RARRES2P11-201ENST00000635158 484 ntBASIC15.1■□□□□ 0.01
SH2D1AO60880 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.1■□□□□ 0.01
SH2D1AO60880 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SH2D1AO60880 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.1■□□□□ 0.01
SH2D1AO60880 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SH2D1AO60880 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SH2D1AO60880 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.09■□□□□ 0.01
SH2D1AO60880 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SH2D1AO60880 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
SH2D1AO60880 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SH2D1AO60880 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SH2D1AO60880 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms