Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
PRICKLE3O43900 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 ABHD17AP1-201ENST00000358206 933 ntBASIC19.47■□□□□ 0.71
PRICKLE3O43900 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.47■□□□□ 0.71
PRICKLE3O43900 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE3O43900 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 AC073314.1-201ENST00000568729 2216 ntBASIC19.46■□□□□ 0.71
PRICKLE3O43900 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE3O43900 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 FEM1AP1-201ENST00000431297 1995 ntBASIC19.46■□□□□ 0.71
PRICKLE3O43900 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE3O43900 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 AP005212.1-201ENST00000581547 1997 ntBASIC19.45■□□□□ 0.7
PRICKLE3O43900 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 AC060766.5-201ENST00000590539 871 ntBASIC19.45■□□□□ 0.7
PRICKLE3O43900 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
PRICKLE3O43900 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE3O43900 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.44■□□□□ 0.7
PRICKLE3O43900 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.44■□□□□ 0.7
PRICKLE3O43900 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 AC020907.5-201ENST00000624372 1936 ntBASIC19.44■□□□□ 0.7
PRICKLE3O43900 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.44■□□□□ 0.7
PRICKLE3O43900 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.44■□□□□ 0.7
PRICKLE3O43900 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.44■□□□□ 0.7
PRICKLE3O43900 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE3O43900 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE3O43900 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE3O43900 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms