Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.59■□□□□ 0.41
XRCC2O43543 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.59■□□□□ 0.41
XRCC2O43543 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.59■□□□□ 0.41
XRCC2O43543 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.59■□□□□ 0.41
XRCC2O43543 AC011767.1-201ENST00000617410 1153 ntBASIC17.59■□□□□ 0.41
XRCC2O43543 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
XRCC2O43543 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
XRCC2O43543 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.59■□□□□ 0.41
XRCC2O43543 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XRCC2O43543 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.59■□□□□ 0.41
XRCC2O43543 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
XRCC2O43543 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.58■□□□□ 0.41
XRCC2O43543 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
XRCC2O43543 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
XRCC2O43543 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.58■□□□□ 0.41
XRCC2O43543 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
XRCC2O43543 AC087633.2-202ENST00000565166 1439 ntBASIC17.58■□□□□ 0.41
XRCC2O43543 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
XRCC2O43543 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
XRCC2O43543 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XRCC2O43543 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.58■□□□□ 0.4
XRCC2O43543 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.58■□□□□ 0.4
XRCC2O43543 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.58■□□□□ 0.4
XRCC2O43543 DUX4L16-201ENST00000555130 1264 ntBASIC17.58■□□□□ 0.4
XRCC2O43543 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.58■□□□□ 0.4
XRCC2O43543 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
XRCC2O43543 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
XRCC2O43543 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.58■□□□□ 0.4
XRCC2O43543 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
XRCC2O43543 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
XRCC2O43543 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
XRCC2O43543 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
XRCC2O43543 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
XRCC2O43543 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.57■□□□□ 0.4
XRCC2O43543 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.57■□□□□ 0.4
XRCC2O43543 AC231657.2-201ENST00000624556 255 ntBASIC17.57■□□□□ 0.4
XRCC2O43543 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.57■□□□□ 0.4
XRCC2O43543 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
XRCC2O43543 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
XRCC2O43543 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
XRCC2O43543 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
XRCC2O43543 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
XRCC2O43543 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
XRCC2O43543 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
XRCC2O43543 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.56■□□□□ 0.4
XRCC2O43543 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
XRCC2O43543 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
XRCC2O43543 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.56■□□□□ 0.4
XRCC2O43543 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.56■□□□□ 0.4
XRCC2O43543 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.56■□□□□ 0.4
XRCC2O43543 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.56■□□□□ 0.4
XRCC2O43543 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 AL356652.1-201ENST00000615962 565 ntBASIC17.56■□□□□ 0.4
XRCC2O43543 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.56■□□□□ 0.4
XRCC2O43543 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.56■□□□□ 0.4
XRCC2O43543 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
XRCC2O43543 CYP21A1P-202ENST00000354927 1481 ntBASIC17.56■□□□□ 0.4
XRCC2O43543 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.56■□□□□ 0.4
XRCC2O43543 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.56■□□□□ 0.4
XRCC2O43543 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.56■□□□□ 0.4
XRCC2O43543 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
XRCC2O43543 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
XRCC2O43543 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
XRCC2O43543 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
XRCC2O43543 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
XRCC2O43543 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
XRCC2O43543 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
XRCC2O43543 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
XRCC2O43543 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms