Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.34■□□□□ 0.53
PRODHO43272 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRODHO43272 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRODHO43272 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRODHO43272 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
PRODHO43272 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRODHO43272 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRODHO43272 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRODHO43272 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRODHO43272 KRT16P2-201ENST00000414673 1423 ntBASIC18.33■□□□□ 0.53
PRODHO43272 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRODHO43272 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.33■□□□□ 0.53
PRODHO43272 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PRODHO43272 BX323043.1-201ENST00000641006 1765 ntBASIC18.33■□□□□ 0.53
PRODHO43272 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRODHO43272 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.33■□□□□ 0.52
PRODHO43272 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 AC110285.6-201ENST00000617652 491 ntBASIC18.33■□□□□ 0.52
PRODHO43272 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.33■□□□□ 0.52
PRODHO43272 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 AC018445.3-201ENST00000624177 1945 ntBASIC18.33■□□□□ 0.52
PRODHO43272 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
PRODHO43272 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRODHO43272 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PRODHO43272 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.32■□□□□ 0.52
PRODHO43272 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PRODHO43272 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PRODHO43272 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PRODHO43272 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRODHO43272 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.32■□□□□ 0.52
PRODHO43272 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.32■□□□□ 0.52
PRODHO43272 AC245052.3-201ENST00000450182 901 ntBASIC18.32■□□□□ 0.52
PRODHO43272 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.32■□□□□ 0.52
PRODHO43272 AC079140.4-201ENST00000507448 529 ntBASIC18.32■□□□□ 0.52
PRODHO43272 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.32■□□□□ 0.52
PRODHO43272 AL031432.3-201ENST00000607698 485 ntBASIC18.32■□□□□ 0.52
PRODHO43272 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PRODHO43272 AC125437.2-201ENST00000625180 2167 ntBASIC18.32■□□□□ 0.52
PRODHO43272 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRODHO43272 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.32■□□□□ 0.52
PRODHO43272 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.31■□□□□ 0.52
PRODHO43272 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PRODHO43272 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PRODHO43272 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.31■□□□□ 0.52
PRODHO43272 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.31■□□□□ 0.52
PRODHO43272 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.31■□□□□ 0.52
PRODHO43272 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.31■□□□□ 0.52
PRODHO43272 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.31■□□□□ 0.52
PRODHO43272 RARRES2P11-201ENST00000635158 484 ntBASIC18.31■□□□□ 0.52
PRODHO43272 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.31■□□□□ 0.52
PRODHO43272 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.31■□□□□ 0.52
PRODHO43272 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PRODHO43272 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRODHO43272 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRODHO43272 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.3■□□□□ 0.52
PRODHO43272 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRODHO43272 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRODHO43272 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRODHO43272 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PRODHO43272 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRODHO43272 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRODHO43272 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRODHO43272 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRODHO43272 AC138907.5-202ENST00000569484 235 ntBASIC18.3■□□□□ 0.52
PRODHO43272 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.3■□□□□ 0.52
PRODHO43272 AC120498.10-201ENST00000621827 505 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms