Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.13■□□□□ 0.81
PHGDHO43175 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 KRT8P36-201ENST00000489121 1440 ntBASIC20.13■□□□□ 0.81
PHGDHO43175 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.13■□□□□ 0.81
PHGDHO43175 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.13■□□□□ 0.81
PHGDHO43175 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.13■□□□□ 0.81
PHGDHO43175 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PHGDHO43175 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.13■□□□□ 0.81
PHGDHO43175 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PHGDHO43175 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.13■□□□□ 0.81
PHGDHO43175 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.12■□□□□ 0.81
PHGDHO43175 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.12■□□□□ 0.81
PHGDHO43175 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.12■□□□□ 0.81
PHGDHO43175 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.12■□□□□ 0.81
PHGDHO43175 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.12■□□□□ 0.81
PHGDHO43175 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.12■□□□□ 0.81
PHGDHO43175 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PHGDHO43175 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.12■□□□□ 0.81
PHGDHO43175 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.12■□□□□ 0.81
PHGDHO43175 MYCNOS-205ENST00000641950 531 ntBASIC20.12■□□□□ 0.81
PHGDHO43175 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PHGDHO43175 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.11■□□□□ 0.81
PHGDHO43175 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.11■□□□□ 0.81
PHGDHO43175 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PHGDHO43175 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PHGDHO43175 DPP3P2-201ENST00000416030 1696 ntBASIC20.11■□□□□ 0.81
PHGDHO43175 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PHGDHO43175 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.11■□□□□ 0.81
PHGDHO43175 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.11■□□□□ 0.81
PHGDHO43175 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
PHGDHO43175 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.11■□□□□ 0.81
PHGDHO43175 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.11■□□□□ 0.81
PHGDHO43175 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.11■□□□□ 0.81
PHGDHO43175 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.11■□□□□ 0.81
PHGDHO43175 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PHGDHO43175 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
PHGDHO43175 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PHGDHO43175 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PHGDHO43175 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PHGDHO43175 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PHGDHO43175 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.1■□□□□ 0.81
PHGDHO43175 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.1■□□□□ 0.81
PHGDHO43175 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
PHGDHO43175 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
PHGDHO43175 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.1■□□□□ 0.81
PHGDHO43175 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PHGDHO43175 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.09■□□□□ 0.81
PHGDHO43175 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.09■□□□□ 0.81
PHGDHO43175 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.09■□□□□ 0.81
PHGDHO43175 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.09■□□□□ 0.81
PHGDHO43175 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PHGDHO43175 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PHGDHO43175 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.09■□□□□ 0.81
PHGDHO43175 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PHGDHO43175 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PHGDHO43175 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
PHGDHO43175 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.09■□□□□ 0.81
PHGDHO43175 CDV3P1-201ENST00000471403 739 ntBASIC20.09■□□□□ 0.81
PHGDHO43175 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms