Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHUKO15111 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHUKO15111 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHUKO15111 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHUKO15111 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHUKO15111 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHUKO15111 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHUKO15111 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CHUKO15111 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.77■□□□□ 0.92
CHUKO15111 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.77■□□□□ 0.92
CHUKO15111 POU5F1P4-201ENST00000413175 1085 ntBASIC20.77■□□□□ 0.92
CHUKO15111 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CHUKO15111 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHUKO15111 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.77■□□□□ 0.92
CHUKO15111 SLC7A5P1-201ENST00000568957 537 ntBASIC20.77■□□□□ 0.92
CHUKO15111 AC008175.2-201ENST00000612840 297 ntBASIC20.77■□□□□ 0.92
CHUKO15111 BID-214ENST00000617586 542 ntTSL 5 BASIC20.77■□□□□ 0.92
CHUKO15111 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHUKO15111 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CHUKO15111 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHUKO15111 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHUKO15111 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHUKO15111 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHUKO15111 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHUKO15111 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.76■□□□□ 0.91
CHUKO15111 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHUKO15111 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHUKO15111 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.76■□□□□ 0.91
CHUKO15111 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.76■□□□□ 0.91
CHUKO15111 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.76■□□□□ 0.91
CHUKO15111 MYCNOS-205ENST00000641950 531 ntBASIC20.76■□□□□ 0.91
CHUKO15111 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHUKO15111 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHUKO15111 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHUKO15111 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.75■□□□□ 0.91
CHUKO15111 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.75■□□□□ 0.91
CHUKO15111 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.75■□□□□ 0.91
CHUKO15111 MFSD11-216ENST00000590393 1141 ntBASIC20.75■□□□□ 0.91
CHUKO15111 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 RARRES2P11-201ENST00000635158 484 ntBASIC20.75■□□□□ 0.91
CHUKO15111 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHUKO15111 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CHUKO15111 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHUKO15111 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.75■□□□□ 0.91
CHUKO15111 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHUKO15111 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHUKO15111 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHUKO15111 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms