Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 LINC02228-203ENST00000641970 1355 ntBASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC138907.5-202ENST00000569484 235 ntBASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC007225.1-201ENST00000566331 1836 ntBASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF103-CHMP3A0A140T963 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF103-CHMP3A0A140T963 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 SMG8-203ENST00000578922 2178 ntBASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF103-CHMP3A0A140T963 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC010141.2-201ENST00000452426 721 ntBASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 AC011484.1-201ENST00000377652 1995 ntBASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF103-CHMP3A0A140T963 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF103-CHMP3A0A140T963 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms