Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 AL691432.2-201ENST00000607222 2038 ntBASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 UNC93B3-201ENST00000308076 687 ntBASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 MIR572-201ENST00000384983 95 ntBASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV27A0A0K0K1C4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 AC024257.2-201ENST00000549699 147 ntBASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 AC027682.1-201ENST00000562846 899 ntBASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 AC120498.10-201ENST00000621827 505 ntBASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV27A0A0K0K1C4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms