Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 RARRES2P10-201ENST00000564312 460 ntBASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 MIR2861-201ENST00000636310 90 ntBASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 AL121829.2-201ENST00000620908 328 ntBASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV17A0A0B4J275 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 Z98882.1-201ENST00000622160 2253 ntBASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 MIR4785-201ENST00000585005 73 ntBASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 REXO1L12P-201ENST00000622156 912 ntBASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV17A0A0B4J275 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.39■□□□□ 0.54
TRAV17A0A0B4J275 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRAV17A0A0B4J275 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV17A0A0B4J275 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV17A0A0B4J275 AL117328.2-201ENST00000624617 1940 ntBASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 TSPY7P-201ENST00000431358 1114 ntBASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV17A0A0B4J275 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 PKD1P6-201ENST00000343738 4769 ntBASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV17A0A0B4J275 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV17A0A0B4J275 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms