Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 KRT8P36-201ENST00000489121 1440 ntBASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PGM5P4-201ENST00000421970 445 ntBASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-8A0A0A6YYG3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 KRT18P61-201ENST00000585825 1298 ntBASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 AC112907.3-201ENST00000577781 2400 ntBASIC14.09□□□□□ -0.15
TRBV6-8A0A0A6YYG3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-8A0A0A6YYG3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-8A0A0A6YYG3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-8A0A0A6YYG3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-8A0A0A6YYG3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 KRT18P11-201ENST00000435214 1283 ntBASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SMG8-203ENST00000578922 2178 ntBASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TERF1P5-201ENST00000477545 1207 ntBASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms