Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC004408.2-201ENST00000623613 2777 ntBASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC116050.2-201ENST00000612102 1779 ntBASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC027612.3-201ENST00000413684 1047 ntBASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-7A0A0A0MS04 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 MIR2861-201ENST00000636310 90 ntBASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC125437.2-201ENST00000625180 2167 ntBASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-7A0A0A0MS04 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L2-201ENST00000561772 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L6-201ENST00000626483 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L1-201ENST00000627662 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L8-201ENST00000629013 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L3-201ENST00000630187 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L7-201ENST00000630678 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DUX4L5-201ENST00000630834 1275 ntBASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRBV6-7A0A0A0MS04 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.92■□□□□ 0.3
TRBV6-7A0A0A0MS04 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms