Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AC020951.1-201ENST00000624361 2271 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 PPCS-204ENST00000372562 966 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AC244157.1-201ENST00000415642 163 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AL031282.1-204ENST00000418950 497 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 RPL12P15-201ENST00000433385 499 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 MTAPP2-201ENST00000437063 832 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 LINC00578-204ENST00000446548 519 ntTSL 4 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 CYP4F25P-201ENST00000446871 520 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AP001120.4-201ENST00000590231 108 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 AC100810.3-201ENST00000633189 2240 ntBASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
SYCE2Q6PIF2 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC8.71□□□□□ -1.01
SYCE2Q6PIF2 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 MICU1-203ENST00000398763 1224 ntTSL 2 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 GLS-205ENST00000409626 997 ntTSL 2 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 RPL7P14-201ENST00000449851 741 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 RN7SL338P-201ENST00000481467 293 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 RNU2-45P-201ENST00000516068 187 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AC090539.2-201ENST00000523425 671 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 ANP32BP1-201ENST00000564205 1297 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 MIR4685-201ENST00000578185 69 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 RN7SL786P-201ENST00000579130 298 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 MIR5705-201ENST00000579870 89 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 MIR3159-201ENST00000584572 74 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 AC009159.3-201ENST00000615570 804 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 MFSD8-234ENST00000641503 1082 ntBASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SYCE2Q6PIF2 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms