Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -1
MTHFRP42898 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
MTHFRP42898 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 MIR301B-201ENST00000390813 78 ntBASIC8.83□□□□□ -1
MTHFRP42898 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 WT1-AS_7.1-201ENST00000426618 294 ntBASIC8.83□□□□□ -1
MTHFRP42898 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.83□□□□□ -1
MTHFRP42898 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.83□□□□□ -1
MTHFRP42898 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 HNRNPCP7-201ENST00000456056 905 ntBASIC8.83□□□□□ -1
MTHFRP42898 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.83□□□□□ -1
MTHFRP42898 RN7SL761P-201ENST00000463259 278 ntBASIC8.83□□□□□ -1
MTHFRP42898 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 AC080188.1-201ENST00000491923 567 ntBASIC8.83□□□□□ -1
MTHFRP42898 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC8.83□□□□□ -1
MTHFRP42898 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 SCARNA9-201ENST00000530422 353 ntBASIC8.83□□□□□ -1
MTHFRP42898 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC8.83□□□□□ -1
MTHFRP42898 OR7E1P-201ENST00000533891 958 ntBASIC8.83□□□□□ -1
MTHFRP42898 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC8.83□□□□□ -1
MTHFRP42898 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 AC060766.2-201ENST00000588235 334 ntBASIC8.83□□□□□ -1
MTHFRP42898 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC8.83□□□□□ -1
MTHFRP42898 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC8.83□□□□□ -1
MTHFRP42898 AC087742.2-201ENST00000616113 740 ntBASIC8.83□□□□□ -1
MTHFRP42898 AC005790.1-201ENST00000619774 450 ntBASIC8.83□□□□□ -1
MTHFRP42898 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
MTHFRP42898 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
MTHFRP42898 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 AL353132.1-201ENST00000415260 2043 ntBASIC8.83□□□□□ -1
MTHFRP42898 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.83□□□□□ -1
MTHFRP42898 CCT5P1-201ENST00000502314 1618 ntBASIC8.83□□□□□ -1
MTHFRP42898 AL590004.4-201ENST00000566733 7060 ntBASIC8.83□□□□□ -1
MTHFRP42898 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.83□□□□□ -1
MTHFRP42898 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC8.83□□□□□ -1
MTHFRP42898 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.82□□□□□ -1
MTHFRP42898 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.82□□□□□ -1
MTHFRP42898 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
MTHFRP42898 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 EEF1A1P15-201ENST00000395772 1408 ntBASIC8.82□□□□□ -1
MTHFRP42898 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 AC009044.1-201ENST00000624577 1798 ntBASIC8.82□□□□□ -1
MTHFRP42898 AC110769.2-201ENST00000602760 1548 ntBASIC8.82□□□□□ -1
MTHFRP42898 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC8.82□□□□□ -1
MTHFRP42898 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.82□□□□□ -1
MTHFRP42898 RN7SKP173-201ENST00000362821 315 ntBASIC8.82□□□□□ -1
MTHFRP42898 SNORA58.1-201ENST00000364133 136 ntBASIC8.82□□□□□ -1
MTHFRP42898 RNA5SP256-201ENST00000390978 113 ntBASIC8.82□□□□□ -1
MTHFRP42898 VN1R11P-201ENST00000407795 868 ntBASIC8.82□□□□□ -1
MTHFRP42898 AL356432.2-201ENST00000407841 422 ntBASIC8.82□□□□□ -1
MTHFRP42898 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC8.82□□□□□ -1
MTHFRP42898 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC8.82□□□□□ -1
MTHFRP42898 AC130472.1-201ENST00000427885 309 ntBASIC8.82□□□□□ -1
MTHFRP42898 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 RPS3AP29-201ENST00000437728 769 ntBASIC8.82□□□□□ -1
MTHFRP42898 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.82□□□□□ -1
MTHFRP42898 AC114755.1-201ENST00000453101 868 ntBASIC8.82□□□□□ -1
MTHFRP42898 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC8.82□□□□□ -1
MTHFRP42898 RPS27P12-201ENST00000464146 258 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms