Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC9.07□□□□□ -0.96
UBE4BO95155 BCAP31P2-201ENST00000563143 399 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 BCAP31P1-201ENST00000565437 385 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC9.07□□□□□ -0.96
UBE4BO95155 AC015911.8-201ENST00000592517 560 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC9.07□□□□□ -0.96
UBE4BO95155 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC9.07□□□□□ -0.96
UBE4BO95155 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC9.07□□□□□ -0.96
UBE4BO95155 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
UBE4BO95155 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC9.07□□□□□ -0.96
UBE4BO95155 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC9.07□□□□□ -0.96
UBE4BO95155 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 TARS2P1-201ENST00000506124 2041 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
UBE4BO95155 AC009148.1-201ENST00000570148 2693 ntBASIC9.07□□□□□ -0.96
UBE4BO95155 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC9.07□□□□□ -0.96
UBE4BO95155 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
UBE4BO95155 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC9.07□□□□□ -0.96
UBE4BO95155 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
UBE4BO95155 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE4BO95155 MIR1272-201ENST00000408106 129 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 GLS-205ENST00000409626 997 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE4BO95155 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE4BO95155 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 AC013467.1-201ENST00000430717 1041 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 RPL21P88-201ENST00000436649 436 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 AC108039.1-201ENST00000456719 609 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 RN7SL28P-201ENST00000488836 298 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 RN7SL464P-201ENST00000492743 297 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE4BO95155 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE4BO95155 KLF3P1-201ENST00000521506 1022 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 OR4A7P-201ENST00000531463 910 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 AC078886.1-201ENST00000549144 554 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC9.06□□□□□ -0.96
UBE4BO95155 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE4BO95155 MIR4314-201ENST00000583321 92 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 GMFG-210ENST00000601387 497 ntTSL 3 BASIC9.06□□□□□ -0.96
UBE4BO95155 VDAC1P5-201ENST00000603132 844 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 HLA-B-257ENST00000640094 147 ntBASIC9.06□□□□□ -0.96
UBE4BO95155 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 HK1-203ENST00000360289 3961 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE4BO95155 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.96
UBE4BO95155 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE4BO95155 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE4BO95155 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
UBE4BO95155 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
UBE4BO95155 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC9.06□□□□□ -0.96
UBE4BO95155 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC9.06□□□□□ -0.96
UBE4BO95155 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
UBE4BO95155 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
UBE4BO95155 TMSB10P1-201ENST00000415070 132 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 AC104455.1-201ENST00000417340 736 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 AC008155.1-201ENST00000421078 329 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 AL671986.1-201ENST00000422197 955 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC9.05□□□□□ -0.96
UBE4BO95155 AC013399.1-201ENST00000450311 418 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 RN7SL107P-201ENST00000478127 283 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 RPL17P37-201ENST00000490729 548 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 MYADML-203ENST00000491596 951 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 IGLVI-68-201ENST00000519525 345 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC9.05□□□□□ -0.96
UBE4BO95155 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
UBE4BO95155 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC9.05□□□□□ -0.96
UBE4BO95155 EIF4A1P4-201ENST00000550578 1213 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC9.05□□□□□ -0.96
UBE4BO95155 PSEN1-223ENST00000557511 1230 ntTSL 5 BASIC9.05□□□□□ -0.96
UBE4BO95155 CYP19A1-210ENST00000557858 832 ntTSL 2 BASIC9.05□□□□□ -0.96
UBE4BO95155 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
UBE4BO95155 AC104046.1-201ENST00000559487 406 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 AC090607.2-201ENST00000560331 695 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC9.05□□□□□ -0.96
UBE4BO95155 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC9.05□□□□□ -0.96
UBE4BO95155 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC9.05□□□□□ -0.96
UBE4BO95155 OR10AE1P-201ENST00000606962 1029 ntBASIC9.05□□□□□ -0.96
UBE4BO95155 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
UBE4BO95155 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
UBE4BO95155 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms