Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 RN7SKP25-201ENST00000362449 308 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 RNA5SP256-201ENST00000390978 113 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 NONOP2-201ENST00000414613 1231 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 TMSB10P1-201ENST00000415070 132 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC8.79□□□□□ -1
LMO3Q8TAP4 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC096915.1-201ENST00000456185 512 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 AC074051.1-201ENST00000470389 781 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 RN7SL107P-201ENST00000478127 283 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 AC009269.1-202ENST00000484381 469 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.79□□□□□ -1
LMO3Q8TAP4 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC055716.1-201ENST00000550077 495 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC8.79□□□□□ -1
LMO3Q8TAP4 PRR13P4-201ENST00000577786 421 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 RN7SL49P-201ENST00000581392 298 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC009686.2-201ENST00000607017 577 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC8.79□□□□□ -1
LMO3Q8TAP4 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LMO3Q8TAP4 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.79□□□□□ -1
LMO3Q8TAP4 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
LMO3Q8TAP4 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 TTTY25P-201ENST00000558356 1505 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 AP000542.3-201ENST00000623391 6114 ntBASIC8.79□□□□□ -1
LMO3Q8TAP4 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.79□□□□□ -1
LMO3Q8TAP4 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC008985.1-201ENST00000624169 2239 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.78□□□□□ -1
LMO3Q8TAP4 RNA5SP426-201ENST00000362901 121 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 CENPW-202ENST00000368326 443 ntTSL 2 BASIC8.78□□□□□ -1
LMO3Q8TAP4 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 CCNYL3-201ENST00000407030 998 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 RPSAP2-201ENST00000416785 888 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 AC008155.1-201ENST00000421078 329 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 SEPHS1P1-201ENST00000426891 958 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC8.78□□□□□ -1
LMO3Q8TAP4 AC005262.1-201ENST00000588562 362 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 AC006238.1-201ENST00000609787 534 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 AC084876.1-201ENST00000612793 641 ntBASIC8.78□□□□□ -1
LMO3Q8TAP4 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC8.78□□□□□ -1
LMO3Q8TAP4 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC8.78□□□□□ -1
LMO3Q8TAP4 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
LMO3Q8TAP4 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
LMO3Q8TAP4 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.78□□□□□ -1
LMO3Q8TAP4 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
LMO3Q8TAP4 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LMO3Q8TAP4 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.77□□□□□ -1
LMO3Q8TAP4 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
LMO3Q8TAP4 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.77□□□□□ -1
LMO3Q8TAP4 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.77□□□□□ -1
LMO3Q8TAP4 FAAH2-201ENST00000374900 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LMO3Q8TAP4 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.77□□□□□ -1.01
LMO3Q8TAP4 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
LMO3Q8TAP4 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms