Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)9.44□□□□□ -0.91e-12■■□□□ 13.3
PRPF8Q6P2Q9 FAM160B2-211ENST00000498344 917 ntTSL 218.33■□□□□ 0.536e-7■■□□□ 13.3
PRPF8Q6P2Q9 FAM160B2-208ENST00000488968 2702 ntTSL 214.14□□□□□ -0.156e-7■■□□□ 13.3
PRPF8Q6P2Q9 PLK1-205ENST00000564794 683 ntTSL 514.8□□□□□ -0.045e-15■■□□□ 13.3
PRPF8Q6P2Q9 EEF1B2-211ENST00000482103 587 ntTSL 23.85□□□□□ -1.793e-7■■□□□ 13.3
PRPF8Q6P2Q9 FXYD5-209ENST00000586925 429 ntTSL 38.01□□□□□ -1.132e-7■■□□□ 13.3
PRPF8Q6P2Q9 FXYD5-212ENST00000591716 682 ntTSL 38.01□□□□□ -1.132e-7■■□□□ 13.3
PRPF8Q6P2Q9 PDLIM1-202ENST00000477757 850 ntTSL 218.15■□□□□ 0.54e-6■■□□□ 13.3
PRPF8Q6P2Q9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.214e-6■■□□□ 13.3
PRPF8Q6P2Q9 LAMA5-207ENST00000471042 487 ntTSL 211.78□□□□□ -0.521e-18■■□□□ 13.3
PRPF8Q6P2Q9 NPRL3-202ENST00000419636 616 ntTSL 513.57□□□□□ -0.241e-11■■□□□ 13.3
PRPF8Q6P2Q9 GET4-206ENST00000464468 676 ntTSL 314.86□□□□□ -0.033e-10■■□□□ 13.3
PRPF8Q6P2Q9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.012e-7■■□□□ 13.3
PRPF8Q6P2Q9 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.63e-6■■□□□ 13.3
PRPF8Q6P2Q9 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.963e-6■■□□□ 13.3
PRPF8Q6P2Q9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.09□□□□□ -1.753e-6■■□□□ 13.3
PRPF8Q6P2Q9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.135e-7■■□□□ 13.3
PRPF8Q6P2Q9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.85□□□□□ -0.355e-7■■□□□ 13.3
PRPF8Q6P2Q9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.445e-7■■□□□ 13.3
PRPF8Q6P2Q9 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC10.28□□□□□ -0.765e-7■■□□□ 13.3
PRPF8Q6P2Q9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.391e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZSCAN26-205ENST00000617168 588 ntTSL 211.94□□□□□ -0.51e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC7.8□□□□□ -1.161e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.291e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC6.94□□□□□ -1.31e-6■■□□□ 13.3
PRPF8Q6P2Q9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.89□□□□□ -1.631e-6■■□□□ 13.3
PRPF8Q6P2Q9 RPS5-206ENST00000598807 970 ntTSL 214.38□□□□□ -0.116e-7■■□□□ 13.3
PRPF8Q6P2Q9 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.591e-13■■□□□ 13.3
PRPF8Q6P2Q9 INTS6-207ENST00000469430 3767 ntTSL 210.45□□□□□ -0.741e-13■■□□□ 13.3
PRPF8Q6P2Q9 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC5.9□□□□□ -1.461e-13■■□□□ 13.3
PRPF8Q6P2Q9 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.33■□□□□ 0.684e-12■■□□□ 13.3
PRPF8Q6P2Q9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.014e-12■■□□□ 13.3
PRPF8Q6P2Q9 AK3-204ENST00000611749 4029 ntTSL 4 BASIC8.02□□□□□ -1.134e-12■■□□□ 13.3
PRPF8Q6P2Q9 ARHGAP27-205ENST00000526484 526 ntTSL 36.54□□□□□ -1.364e-6■■□□□ 13.3
PRPF8Q6P2Q9 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.44□□□□□ -1.74e-12■■□□□ 13.3
PRPF8Q6P2Q9 NSD2-213ENST00000503207 812 ntTSL 311.95□□□□□ -0.52e-7■■□□□ 13.3
PRPF8Q6P2Q9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.431e-7■■□□□ 13.3
PRPF8Q6P2Q9 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.471e-7■■□□□ 13.3
PRPF8Q6P2Q9 ATP5A1-205ENST00000586592 2214 ntTSL 217.6■□□□□ 0.411e-6■■□□□ 13.3
PRPF8Q6P2Q9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.11■□□□□ 0.331e-6■■□□□ 13.3
PRPF8Q6P2Q9 ATP5A1-211ENST00000590156 1931 ntTSL 212.02□□□□□ -0.481e-6■■□□□ 13.3
PRPF8Q6P2Q9 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.561e-6■■□□□ 13.3
PRPF8Q6P2Q9 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.38□□□□□ -0.591e-6■■□□□ 13.3
PRPF8Q6P2Q9 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.031e-6■■□□□ 13.3
PRPF8Q6P2Q9 TLE3-210ENST00000557984 478 ntTSL 224.04■■□□□ 1.442e-10■■□□□ 13.3
PRPF8Q6P2Q9 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.88□□□□□ -0.991e-8■■□□□ 13.3
PRPF8Q6P2Q9 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.011e-8■■□□□ 13.3
PRPF8Q6P2Q9 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.69□□□□□ -1.341e-8■■□□□ 13.3
PRPF8Q6P2Q9 CCND1-206ENST00000545484 430 ntTSL 518.37■□□□□ 0.532e-17■■□□□ 13.3
PRPF8Q6P2Q9 FKBP2-204ENST00000535135 639 ntTSL 320.87■□□□□ 0.934e-9■■□□□ 13.3
PRPF8Q6P2Q9 FKBP2-205ENST00000536642 637 ntTSL 216.83■□□□□ 0.284e-9■■□□□ 13.3
PRPF8Q6P2Q9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.86□□□□□ -0.191e-7■■□□□ 13.3
PRPF8Q6P2Q9 NFE2L2-205ENST00000430047 451 ntTSL 319.74■□□□□ 0.754e-10■■□□□ 13.3
PRPF8Q6P2Q9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC11.53□□□□□ -0.564e-10■■□□□ 13.3
PRPF8Q6P2Q9 NFE2L2-213ENST00000586532 942 ntTSL 51.23□□□□□ -2.214e-10■■□□□ 13.3
PRPF8Q6P2Q9 RNF44-202ENST00000504160 887 ntTSL 314.4□□□□□ -0.13e-15■■□□□ 13.3
PRPF8Q6P2Q9 POLRMT-206ENST00000590709 1106 ntTSL 214.34□□□□□ -0.119e-7■■□□□ 13.3
PRPF8Q6P2Q9 MYH9-210ENST00000486218 788 ntTSL 316.44■□□□□ 0.226e-8■■□□□ 13.3
PRPF8Q6P2Q9 MYH9-208ENST00000475726 768 ntTSL 313.82□□□□□ -0.26e-8■■□□□ 13.3
PRPF8Q6P2Q9 ARL5A-205ENST00000487723 696 ntTSL 318.56■□□□□ 0.565e-7■■□□□ 13.3
PRPF8Q6P2Q9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.63■□□□□ 0.415e-7■■□□□ 13.3
PRPF8Q6P2Q9 ARL5A-204ENST00000458140 1076 ntTSL 517.58■□□□□ 0.415e-7■■□□□ 13.3
PRPF8Q6P2Q9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.055e-7■■□□□ 13.3
PRPF8Q6P2Q9 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.125e-7■■□□□ 13.3
PRPF8Q6P2Q9 AC068547.1-202ENST00000637224 2827 ntAPPRIS ALT2 TSL 56.33□□□□□ -1.45e-7■■□□□ 13.3
PRPF8Q6P2Q9 AC068547.1-201ENST00000636024 1303 ntAPPRIS ALT2 TSL 55.07□□□□□ -1.65e-7■■□□□ 13.3
PRPF8Q6P2Q9 ARL5A-203ENST00000446896 1268 ntTSL 24.92□□□□□ -1.625e-7■■□□□ 13.3
PRPF8Q6P2Q9 METTL22-208ENST00000563501 519 ntTSL 58.93□□□□□ -0.985e-18■■□□□ 13.3
PRPF8Q6P2Q9 SLC3A2-218ENST00000541649 515 ntTSL 36.15□□□□□ -1.422e-13■■□□□ 13.3
PRPF8Q6P2Q9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.85■□□□□ 0.771e-10■■□□□ 13.3
PRPF8Q6P2Q9 CUL4A-210ENST00000494985 292 ntTSL 519.43■□□□□ 0.71e-10■■□□□ 13.3
PRPF8Q6P2Q9 CUL4A-208ENST00000474116 866 ntTSL 215.37■□□□□ 0.051e-10■■□□□ 13.3
PRPF8Q6P2Q9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.162e-6■■□□□ 13.3
PRPF8Q6P2Q9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.212e-6■■□□□ 13.3
PRPF8Q6P2Q9 ENO3-217ENST00000571235 559 ntTSL 411.12□□□□□ -0.632e-7■■□□□ 13.3
PRPF8Q6P2Q9 XPOT-204ENST00000540203 548 ntTSL 410.66□□□□□ -0.71e-8■■□□□ 13.3
PRPF8Q6P2Q9 NEIL1-201ENST00000355059 3759 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.862e-6■■□□□ 13.3
PRPF8Q6P2Q9 CCNY-210ENST00000497692 478 ntTSL 29.61□□□□□ -0.871e-8■■□□□ 13.3
PRPF8Q6P2Q9 KHNYN-204ENST00000556255 2198 ntTSL 28.5□□□□□ -1.051e-8■■□□□ 13.3
PRPF8Q6P2Q9 NEIL1-202ENST00000561643 3271 ntTSL 58.27□□□□□ -1.092e-6■■□□□ 13.3
PRPF8Q6P2Q9 RBL2-206ENST00000562850 745 ntTSL 48.04□□□□□ -1.124e-9■■□□□ 13.3
PRPF8Q6P2Q9 SF3A1-208ENST00000485618 593 ntTSL 26.89□□□□□ -1.311e-8■■□□□ 13.3
PRPF8Q6P2Q9 XPOT-202ENST00000400935 984 ntTSL 25.36□□□□□ -1.551e-8■■□□□ 13.3
PRPF8Q6P2Q9 SARS-203ENST00000468588 1582 ntTSL 24.13□□□□□ -1.751e-8■■□□□ 13.3
PRPF8Q6P2Q9 CLTC-214ENST00000585198 477 ntTSL 53.81□□□□□ -1.81e-8■■□□□ 13.3
PRPF8Q6P2Q9 CLTC-204ENST00000472129 654 ntTSL 20.57□□□□□ -2.321e-8■■□□□ 13.3
PRPF8Q6P2Q9 HDGFL2-207ENST00000615225 3100 ntTSL 513.69□□□□□ -0.229e-7■■□□□ 13.3
PRPF8Q6P2Q9 FARP1-230ENST00000600380 510 ntTSL 39.93□□□□□ -0.823e-25■■□□□ 13.3
PRPF8Q6P2Q9 FARP1-221ENST00000597596 439 ntTSL 35.25□□□□□ -1.573e-25■■□□□ 13.3
PRPF8Q6P2Q9 PLCXD1-207ENST00000443019 284 ntTSL 512.39□□□□□ -0.432e-11■■□□□ 13.3
PRPF8Q6P2Q9 COLGALT1-203ENST00000597075 737 ntTSL 213.86□□□□□ -0.199e-8■■□□□ 13.3
PRPF8Q6P2Q9 COLGALT1-204ENST00000597147 654 ntAPPRIS ALT2 TSL 512.01□□□□□ -0.499e-8■■□□□ 13.3
PRPF8Q6P2Q9 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.669e-8■■□□□ 13.3
PRPF8Q6P2Q9 PI4KAP1-208ENST00000619742 1787 ntTSL 212.92□□□□□ -0.343e-14■■□□□ 13.3
PRPF8Q6P2Q9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.69□□□□□ -0.543e-14■■□□□ 13.3
PRPF8Q6P2Q9 PDAP1-202ENST00000426447 767 ntTSL 512.88□□□□□ -0.354e-7■■□□□ 13.3
PRPF8Q6P2Q9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.354e-7■■□□□ 13.3
PRPF8Q6P2Q9 RGS14-210ENST00000512000 559 ntTSL 313.06□□□□□ -0.324e-9■■□□□ 13.3
PRPF8Q6P2Q9 AJUBA-207ENST00000555479 558 ntTSL 410.08□□□□□ -0.81e-22■■□□□ 13.3
PRPF8Q6P2Q9 FAM102A-207ENST00000494606 536 ntTSL 312.4□□□□□ -0.428e-15■■□□□ 13.3
Retrieved 100 of 73,762 protein–RNA pairs in 1213.1 ms