Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 DLSTP1-201ENST00000444241 1354 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 BECN1P2-201ENST00000407947 812 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC006455.7-201ENST00000422502 392 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC005099.1-201ENST00000442083 610 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 RPL34P1-201ENST00000450455 354 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC092634.4-203ENST00000451395 448 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC025062.1-201ENST00000465163 644 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 RN7SL35P-201ENST00000466169 292 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 RN7SL62P-201ENST00000498506 297 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 IGHVII-15-1-201ENST00000517931 220 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 OR4B2P-201ENST00000527724 882 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC010480.1-201ENST00000624823 684 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.77□□□□□ -1.17
SNX18Q96RF0 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 NIPA2P4-201ENST00000523928 1341 ntBASIC7.77□□□□□ -1.17
SNX18Q96RF0 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 AL049636.1-201ENST00000455736 1357 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 ITGB3BP-202ENST00000371092 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 INIP-201ENST00000374234 713 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC004129.1-201ENST00000417617 796 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 TARDBPP2-201ENST00000448913 1231 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AP001318.1-201ENST00000476981 321 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 RPL36P16-201ENST00000496996 306 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 AMD1P3-201ENST00000508874 994 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC080079.1-201ENST00000509326 1045 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 WDR61-202ENST00000558311 1266 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 PDLIM1P3-201ENST00000582370 599 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC008734.2-201ENST00000595277 477 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC091810.1-201ENST00000603131 325 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC083862.2-201ENST00000608819 1145 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 uc_338.3-201ENST00000613268 181 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 YARS-210ENST00000616261 1167 ntTSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 AL356289.3-201ENST00000640049 2669 ntBASIC7.76□□□□□ -1.17
SNX18Q96RF0 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.76□□□□□ -1.17
SNX18Q96RF0 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SNX18Q96RF0 AC013444.1-201ENST00000428909 1904 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms