Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AL137845.1-201ENST00000340681 1110 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 RNA5SP71-201ENST00000362967 126 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 SNORA58.1-201ENST00000364133 136 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 CENPW-201ENST00000368325 528 ntTSL 3 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 ITGB3BP-202ENST00000371092 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 RCL1-201ENST00000381728 758 ntTSL 3 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 MIR1269A-201ENST00000408636 105 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 EIF3IP1-201ENST00000433048 967 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 ACTBP12-201ENST00000435871 418 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC244505.1-201ENST00000502642 307 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 IGKV2D-14-201ENST00000522473 355 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 OR4A19P-201ENST00000533579 1103 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC005786.4-201ENST00000623369 682 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AC010894.5-201ENST00000624428 951 ntBASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC7.74□□□□□ -1.17
NPIPA3F8WFD2 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AL049636.1-201ENST00000455736 1357 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 U3.34-201ENST00000408198 212 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 UBTFL7-201ENST00000418789 1191 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 CLUHP5-201ENST00000438421 774 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC242426.2-201ENST00000446956 795 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC046195.2-201ENST00000519652 541 ntTSL 4 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC090079.1-201ENST00000572092 1183 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 MIR4314-201ENST00000583321 92 ntBASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPIPA3F8WFD2 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AL353622.1-201ENST00000604716 1945 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms