Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX49Q9Y6V7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 AC007322.1-201ENST00000426983 750 ntBASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
DDX49Q9Y6V7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 ABHD17AP1-201ENST00000358206 933 ntBASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 TSPY6P-201ENST00000448518 926 ntBASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 AC098934.4-201ENST00000564127 592 ntBASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 AC138907.5-202ENST00000569484 235 ntBASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.27■■□□□ 1.48
DDX49Q9Y6V7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 AL121832.2-201ENST00000610979 668 ntBASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX49Q9Y6V7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 AC231657.2-201ENST00000624556 255 ntBASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DDX49Q9Y6V7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 AC027702.1-201ENST00000563810 1770 ntBASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 AC010536.3-201ENST00000620306 533 ntBASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms