Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 KRT18P68-201ENST00000392293 1000 ntBASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 AC008403.3-201ENST00000598924 454 ntBASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 RPS2P4-201ENST00000476944 856 ntBASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGA3Q9Y5H0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 AC007322.3-201ENST00000426526 701 ntBASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 UNC93B4-201ENST00000505679 747 ntBASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA3Q9Y5H0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 UBE2SP1-201ENST00000450587 669 ntBASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA3Q9Y5H0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 AC026471.6-201ENST00000622954 1905 ntBASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 PNMA6B-201ENST00000538162 1200 ntBASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA3Q9Y5H0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGA3Q9Y5H0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms