Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 GCSHP5-201ENST00000443090 522 ntBASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 AL162412.1-201ENST00000567129 965 ntBASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 AL591742.1-201ENST00000604433 565 ntBASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 AC097658.1-201ENST00000475555 843 ntBASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB1Q9Y5F3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 AL158047.1-201ENST00000445918 881 ntBASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 FAM21FP-204ENST00000608637 956 ntBASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 MIR2861-201ENST00000636310 90 ntBASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 AP006294.2-201ENST00000641667 209 ntBASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHB1Q9Y5F3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 AP005212.1-201ENST00000581547 1997 ntBASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 AC091874.3-201ENST00000512672 1195 ntBASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 AC006058.3-201ENST00000606217 1069 ntBASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 LINC01521-201ENST00000504184 1943 ntBASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB1Q9Y5F3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB1Q9Y5F3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PCDHB1Q9Y5F3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHB1Q9Y5F3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.27■□□□□ 0.83
PCDHB1Q9Y5F3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB1Q9Y5F3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms