Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.31■■□□□ 1
YIPF1Q9Y548 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
YIPF1Q9Y548 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.31■■□□□ 1
YIPF1Q9Y548 AC121338.2-201ENST00000622535 1744 ntBASIC21.31■■□□□ 1
YIPF1Q9Y548 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
YIPF1Q9Y548 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
YIPF1Q9Y548 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.3■■□□□ 1
YIPF1Q9Y548 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.3■■□□□ 1
YIPF1Q9Y548 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 AC239809.2-201ENST00000415381 517 ntBASIC21.3■■□□□ 1
YIPF1Q9Y548 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.3■■□□□ 1
YIPF1Q9Y548 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.3■■□□□ 1
YIPF1Q9Y548 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
YIPF1Q9Y548 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
YIPF1Q9Y548 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.3■■□□□ 1
YIPF1Q9Y548 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.3■■□□□ 1
YIPF1Q9Y548 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.3■■□□□ 1
YIPF1Q9Y548 AC124016.1-201ENST00000609552 612 ntBASIC21.3■■□□□ 1
YIPF1Q9Y548 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.3■■□□□ 1
YIPF1Q9Y548 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
YIPF1Q9Y548 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
YIPF1Q9Y548 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.29■■□□□ 1
YIPF1Q9Y548 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.29■■□□□ 1
YIPF1Q9Y548 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.29■■□□□ 1
YIPF1Q9Y548 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.29■■□□□ 1
YIPF1Q9Y548 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.29■■□□□ 1
YIPF1Q9Y548 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.29■■□□□ 1
YIPF1Q9Y548 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.29■■□□□ 1
YIPF1Q9Y548 Z99916.2-201ENST00000604037 246 ntBASIC21.29■■□□□ 1
YIPF1Q9Y548 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.29■■□□□ 1
YIPF1Q9Y548 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
YIPF1Q9Y548 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.29■■□□□ 1
YIPF1Q9Y548 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.29■■□□□ 1
YIPF1Q9Y548 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.28■■□□□ 1
YIPF1Q9Y548 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.28■■□□□ 1
YIPF1Q9Y548 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.28■■□□□ 1
YIPF1Q9Y548 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.28■■□□□ 1
YIPF1Q9Y548 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.28■■□□□ 1
YIPF1Q9Y548 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
YIPF1Q9Y548 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
YIPF1Q9Y548 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.27■■□□□ 1
YIPF1Q9Y548 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.27■■□□□ 1
YIPF1Q9Y548 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YIPF1Q9Y548 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.27■■□□□ 1
YIPF1Q9Y548 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YIPF1Q9Y548 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YIPF1Q9Y548 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
YIPF1Q9Y548 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
YIPF1Q9Y548 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
YIPF1Q9Y548 AC133681.1-201ENST00000465482 601 ntBASIC21.27■■□□□ 1
YIPF1Q9Y548 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.27■■□□□ 1
YIPF1Q9Y548 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms