Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 AP001160.3-201ENST00000601484 763 ntBASIC19.07■□□□□ 0.64
RNF6Q9Y252 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 AC005181.1-201ENST00000604782 1256 ntBASIC19.07■□□□□ 0.64
RNF6Q9Y252 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 AP004607.7-201ENST00000527152 1677 ntBASIC19.07■□□□□ 0.64
RNF6Q9Y252 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF6Q9Y252 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF6Q9Y252 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 MYCNOS-205ENST00000641950 531 ntBASIC19.06■□□□□ 0.64
RNF6Q9Y252 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF6Q9Y252 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF6Q9Y252 AC020907.5-201ENST00000624372 1936 ntBASIC19.06■□□□□ 0.64
RNF6Q9Y252 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 AC142086.2-201ENST00000569753 217 ntBASIC19.05■□□□□ 0.64
RNF6Q9Y252 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF6Q9Y252 AC055733.4-201ENST00000638462 1354 ntBASIC19.05■□□□□ 0.64
RNF6Q9Y252 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF6Q9Y252 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 TSPY6P-201ENST00000448518 926 ntBASIC19.04■□□□□ 0.64
RNF6Q9Y252 CD99P1-205ENST00000527459 561 ntBASIC19.04■□□□□ 0.64
RNF6Q9Y252 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF6Q9Y252 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF6Q9Y252 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF6Q9Y252 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF6Q9Y252 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF6Q9Y252 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF6Q9Y252 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF6Q9Y252 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms