Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 MIR4785-201ENST00000585005 73 ntBASIC26.68■■□□□ 1.86
SPG7Q9UQ90 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPG7Q9UQ90 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.67■■□□□ 1.86
SPG7Q9UQ90 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 AC023632.3-201ENST00000521633 145 ntBASIC26.66■■□□□ 1.86
SPG7Q9UQ90 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SPG7Q9UQ90 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 FAM210CP-201ENST00000445714 574 ntBASIC26.65■■□□□ 1.86
SPG7Q9UQ90 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SPG7Q9UQ90 AC027702.1-201ENST00000563810 1770 ntBASIC26.64■■□□□ 1.86
SPG7Q9UQ90 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 AL121829.2-201ENST00000620908 328 ntBASIC26.64■■□□□ 1.86
SPG7Q9UQ90 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.64■■□□□ 1.86
SPG7Q9UQ90 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.64■■□□□ 1.85
SPG7Q9UQ90 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
SPG7Q9UQ90 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
SPG7Q9UQ90 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SPG7Q9UQ90 AC244015.2-201ENST00000616358 1861 ntBASIC26.64■■□□□ 1.85
SPG7Q9UQ90 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SPG7Q9UQ90 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SPG7Q9UQ90 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
SPG7Q9UQ90 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms