Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC31.58■■■□□ 2.65
CDK11AQ9UQ88 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 TUB-203ENST00000534099 1759 ntTSL 2 BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.57■■■□□ 2.64
CDK11AQ9UQ88 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 KRT16P5-201ENST00000455284 522 ntBASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 Six3os1_6.1-201ENST00000620790 196 ntBASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.56■■■□□ 2.64
CDK11AQ9UQ88 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 AC026471.5-201ENST00000615068 467 ntBASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
CDK11AQ9UQ88 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 PALM-207ENST00000590161 2137 ntTSL 4 BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 AF186192.3-201ENST00000583427 947 ntBASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDK11AQ9UQ88 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 AL353807.1-201ENST00000427475 662 ntBASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
CDK11AQ9UQ88 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CDK11AQ9UQ88 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CDK11AQ9UQ88 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.51■■■□□ 2.64
CDK11AQ9UQ88 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 AC027702.1-201ENST00000563810 1770 ntBASIC31.51■■■□□ 2.63
CDK11AQ9UQ88 HTR7P1-201ENST00000538670 1336 ntBASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms