Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPS3Q9UNS2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 IRS3P-201ENST00000223076 1006 ntBASIC18.06■□□□□ 0.48
COPS3Q9UNS2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 SLC7A5P2-201ENST00000553010 536 ntBASIC18.06■□□□□ 0.48
COPS3Q9UNS2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 AL139246.5-201ENST00000606645 996 ntBASIC18.06■□□□□ 0.48
COPS3Q9UNS2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 AC116050.2-201ENST00000612102 1779 ntBASIC18.06■□□□□ 0.48
COPS3Q9UNS2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPS3Q9UNS2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 AC142381.2-201ENST00000566120 298 ntBASIC18.05■□□□□ 0.48
COPS3Q9UNS2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
COPS3Q9UNS2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 AC120498.10-201ENST00000621827 505 ntBASIC18.04■□□□□ 0.48
COPS3Q9UNS2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COPS3Q9UNS2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 AC027612.3-201ENST00000413684 1047 ntBASIC18.03■□□□□ 0.48
COPS3Q9UNS2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 AC104187.1-201ENST00000607510 612 ntBASIC18.03■□□□□ 0.48
COPS3Q9UNS2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.03■□□□□ 0.48
COPS3Q9UNS2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COPS3Q9UNS2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms