Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 KRT18P68-201ENST00000392293 1000 ntBASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 AL158047.1-201ENST00000445918 881 ntBASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 AC098590.1-201ENST00000468126 897 ntBASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 AC026366.1-201ENST00000488803 879 ntBASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 AP003097.1-201ENST00000530657 1135 ntBASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPA1Q9UND3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NPIPA1Q9UND3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPIPA1Q9UND3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 AC142381.4-202ENST00000563973 229 ntBASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NPIPA1Q9UND3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 GCSHP5-201ENST00000443090 522 ntBASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 AP006294.2-201ENST00000641667 209 ntBASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA1Q9UND3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 AC060766.5-201ENST00000590539 871 ntBASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 AC073648.6-201ENST00000641589 218 ntBASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA1Q9UND3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms