Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHTF1Q9UMS5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PHTF1Q9UMS5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PHTF1Q9UMS5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PHTF1Q9UMS5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PHTF1Q9UMS5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
PHTF1Q9UMS5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PHTF1Q9UMS5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHTF1Q9UMS5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 AC068338.2-201ENST00000563278 1430 ntBASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 AL591742.1-201ENST00000604433 565 ntBASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHTF1Q9UMS5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 AL162412.1-201ENST00000567129 965 ntBASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 AC005181.1-201ENST00000604782 1256 ntBASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
PHTF1Q9UMS5 PLK5-205ENST00000642079 1969 ntBASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 CROCCP5-201ENST00000436658 830 ntBASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHTF1Q9UMS5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms