Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.09■□□□□ 0.33
UBQLN2Q9UHD9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 NOC2LP1-202ENST00000452600 2235 ntBASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBQLN2Q9UHD9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 MIR6724-1-201ENST00000616420 92 ntBASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 MIR6724-2-201ENST00000616483 92 ntBASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 MIR6724-4-201ENST00000617390 92 ntBASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 MIR6724-3-201ENST00000622482 92 ntBASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN2Q9UHD9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 AC007225.1-201ENST00000566331 1836 ntBASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 TCF3P1-201ENST00000423021 1937 ntBASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN2Q9UHD9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 BCL2-203ENST00000589955 5011 ntBASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 MIR6722-201ENST00000617286 78 ntBASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms