Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
CLN8Q9UBY8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 MIPEPP3-201ENST00000412105 444 ntBASIC17.12■□□□□ 0.33
CLN8Q9UBY8 BX276092.2-201ENST00000417668 665 ntBASIC17.12■□□□□ 0.33
CLN8Q9UBY8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 AL138781.1-201ENST00000566567 1274 ntBASIC17.12■□□□□ 0.33
CLN8Q9UBY8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 AC100791.3-201ENST00000617619 330 ntBASIC17.12■□□□□ 0.33
CLN8Q9UBY8 AC133041.1-202ENST00000642053 222 ntBASIC17.12■□□□□ 0.33
CLN8Q9UBY8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN8Q9UBY8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 PLK5-205ENST00000642079 1969 ntBASIC17.11■□□□□ 0.33
CLN8Q9UBY8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 AC006128.1-201ENST00000624704 1661 ntBASIC17.11■□□□□ 0.33
CLN8Q9UBY8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN8Q9UBY8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLN8Q9UBY8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 LINC01006-201ENST00000333319 2292 ntBASIC17.09■□□□□ 0.33
CLN8Q9UBY8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 MCRIP2P1-201ENST00000394346 511 ntBASIC17.09■□□□□ 0.33
CLN8Q9UBY8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLN8Q9UBY8 LSM12P1-201ENST00000411836 588 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms