Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL20A1Q9P218 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.1■■□□□ 1.29
COL20A1Q9P218 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL20A1Q9P218 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL20A1Q9P218 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL20A1Q9P218 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL20A1Q9P218 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 C1QBPP2-201ENST00000528754 825 ntBASIC23.09■■□□□ 1.29
COL20A1Q9P218 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL20A1Q9P218 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.09■■□□□ 1.29
COL20A1Q9P218 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 AC120498.8-201ENST00000614275 531 ntBASIC23.08■■□□□ 1.29
COL20A1Q9P218 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.08■■□□□ 1.29
COL20A1Q9P218 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL20A1Q9P218 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL20A1Q9P218 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL20A1Q9P218 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL20A1Q9P218 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL20A1Q9P218 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.07■■□□□ 1.28
COL20A1Q9P218 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.07■■□□□ 1.28
COL20A1Q9P218 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.07■■□□□ 1.28
COL20A1Q9P218 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.07■■□□□ 1.28
COL20A1Q9P218 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL20A1Q9P218 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.07■■□□□ 1.28
COL20A1Q9P218 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL20A1Q9P218 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.07■■□□□ 1.28
COL20A1Q9P218 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL20A1Q9P218 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 AC005229.4-201ENST00000610085 2198 ntBASIC23.06■■□□□ 1.28
COL20A1Q9P218 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL20A1Q9P218 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.06■■□□□ 1.28
COL20A1Q9P218 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL20A1Q9P218 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL20A1Q9P218 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 MTDHP1-201ENST00000605323 784 ntBASIC23.05■■□□□ 1.28
COL20A1Q9P218 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL20A1Q9P218 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.05■■□□□ 1.28
COL20A1Q9P218 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL20A1Q9P218 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL20A1Q9P218 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL20A1Q9P218 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.04■■□□□ 1.28
COL20A1Q9P218 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL20A1Q9P218 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms