Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 ID1-201ENST00000376105 1233 ntBASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 AC003102.1-202ENST00000563394 1796 ntBASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.42■□□□□ 0.54
NPAP1Q9NZP6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 DUX4L16-201ENST00000555130 1264 ntBASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPAP1Q9NZP6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 KRT18P20-201ENST00000548986 1279 ntBASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPAP1Q9NZP6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPAP1Q9NZP6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NPAP1Q9NZP6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.39■□□□□ 0.54
NPAP1Q9NZP6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NPAP1Q9NZP6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 MIR663A-201ENST00000385250 93 ntBASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 HLA-L-209ENST00000420110 1011 ntBASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 SLC7A5P2-201ENST00000553010 536 ntBASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPAP1Q9NZP6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms