Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 AP004607.7-201ENST00000527152 1677 ntBASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD3Q9NX63 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 MIR4787-201ENST00000607364 84 ntBASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 AP000997.3-201ENST00000623333 2250 ntBASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD3Q9NX63 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 BCL2-203ENST00000589955 5011 ntBASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.79■□□□□ 0.6
CHCHD3Q9NX63 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 PCDHAC2-203ENST00000615316 3011 ntBASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 PLK5-205ENST00000642079 1969 ntBASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHCHD3Q9NX63 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms