Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.57■□□□□ 0.88
ABCF3Q9NUQ8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 AC007225.1-201ENST00000566331 1836 ntBASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.56■□□□□ 0.88
ABCF3Q9NUQ8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 MIR935-201ENST00000401179 91 ntBASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 KRT18P14-201ENST00000534205 1250 ntBASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ABCF3Q9NUQ8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ABCF3Q9NUQ8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 AC123595.1-201ENST00000440769 1046 ntBASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 AC087623.3-201ENST00000607047 1098 ntBASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.53■□□□□ 0.88
ABCF3Q9NUQ8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms