Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 AC004854.2-201ENST00000608450 1441 ntBASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.84■□□□□ 0.29
LIN7CQ9NUP9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
LIN7CQ9NUP9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 AC092720.2-201ENST00000602388 1665 ntBASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 AC008175.2-201ENST00000612840 297 ntBASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.83■□□□□ 0.28
LIN7CQ9NUP9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 AFG3L1P-217ENST00000557444 2447 ntBASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 AC007952.6-201ENST00000573168 2673 ntBASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 AC003957.1-201ENST00000625108 2673 ntBASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LIN7CQ9NUP9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 AC061975.6-201ENST00000579045 1553 ntBASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 AC099778.1-201ENST00000568593 1911 ntBASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 POU5F1P4-201ENST00000413175 1085 ntBASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 AC138907.5-202ENST00000569484 235 ntBASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 AC104187.1-201ENST00000607510 612 ntBASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LIN7CQ9NUP9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIN7CQ9NUP9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms