Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42SE2Q9NRR3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 AC010141.2-201ENST00000452426 721 ntBASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CDC42SE2Q9NRR3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 SUDS3P1-201ENST00000505831 966 ntBASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC42SE2Q9NRR3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CDC42SE2Q9NRR3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L2-201ENST00000561772 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 MIR6084-201ENST00000622012 110 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L6-201ENST00000626483 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L1-201ENST00000627662 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L8-201ENST00000629013 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L3-201ENST00000630187 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L7-201ENST00000630678 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 DUX4L5-201ENST00000630834 1275 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42SE2Q9NRR3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms