Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 AL355472.2-201ENST00000422958 438 ntBASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 AC104771.1-201ENST00000603335 964 ntBASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAF3Q9NRP4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 HLA-L-209ENST00000420110 1011 ntBASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 AC007225.1-201ENST00000566331 1836 ntBASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 FP700111.2-201ENST00000619190 1892 ntBASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAF3Q9NRP4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 KRT8P36-201ENST00000489121 1440 ntBASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 AC105020.6-201ENST00000621523 1217 ntBASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SDHAF3Q9NRP4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 AC092118.2-201ENST00000613495 667 ntBASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SDHAF3Q9NRP4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 GUSBP6-202ENST00000438529 1198 ntBASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 AC133041.1-202ENST00000642053 222 ntBASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.59■□□□□ 0.57
SDHAF3Q9NRP4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms