Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 AC006015.1-201ENST00000429970 570 ntBASIC18.84■□□□□ 0.61
POLE3Q9NRF9 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.84■□□□□ 0.61
POLE3Q9NRF9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 MFSD11-216ENST00000590393 1141 ntBASIC18.84■□□□□ 0.61
POLE3Q9NRF9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
POLE3Q9NRF9 AL162377.1-201ENST00000618844 1793 ntBASIC18.83■□□□□ 0.61
POLE3Q9NRF9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.83■□□□□ 0.61
POLE3Q9NRF9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
POLE3Q9NRF9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 AC092667.1-201ENST00000434301 2586 ntBASIC18.82■□□□□ 0.6
POLE3Q9NRF9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.82■□□□□ 0.6
POLE3Q9NRF9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLE3Q9NRF9 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.81■□□□□ 0.6
POLE3Q9NRF9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 RNF165-205ENST00000588679 2904 ntBASIC18.81■□□□□ 0.6
POLE3Q9NRF9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 AC087633.2-202ENST00000565166 1439 ntBASIC18.81■□□□□ 0.6
POLE3Q9NRF9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
POLE3Q9NRF9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLE3Q9NRF9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms