Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.05■□□□□ 0.64
KLHL1Q9NR64 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 AC091799.1-201ENST00000422823 811 ntBASIC19.04■□□□□ 0.64
KLHL1Q9NR64 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KLHL1Q9NR64 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 AC097658.1-201ENST00000475555 843 ntBASIC19.03■□□□□ 0.64
KLHL1Q9NR64 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KLHL1Q9NR64 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 LSM12P1-201ENST00000411836 588 ntBASIC19.02■□□□□ 0.64
KLHL1Q9NR64 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.02■□□□□ 0.64
KLHL1Q9NR64 CDV3P1-201ENST00000471403 739 ntBASIC19.02■□□□□ 0.64
KLHL1Q9NR64 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KLHL1Q9NR64 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
KLHL1Q9NR64 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
KLHL1Q9NR64 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KLHL1Q9NR64 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KLHL1Q9NR64 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 AL355472.2-201ENST00000422958 438 ntBASIC19.01■□□□□ 0.63
KLHL1Q9NR64 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 DUSP5P2-201ENST00000426873 1033 ntBASIC19.01■□□□□ 0.63
KLHL1Q9NR64 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.01■□□□□ 0.63
KLHL1Q9NR64 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KLHL1Q9NR64 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms