Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PFDN4Q9NQP4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN4Q9NQP4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PFDN4Q9NQP4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.92■□□□□ 0.78
PFDN4Q9NQP4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 AC245052.3-201ENST00000450182 901 ntBASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PFDN4Q9NQP4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 AC079140.4-201ENST00000507448 529 ntBASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 KRT16P2-201ENST00000414673 1423 ntBASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 AC092720.2-201ENST00000602388 1665 ntBASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.9■□□□□ 0.78
PFDN4Q9NQP4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PFDN4Q9NQP4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PFDN4Q9NQP4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PFDN4Q9NQP4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PFDN4Q9NQP4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PFDN4Q9NQP4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.89■□□□□ 0.77
PFDN4Q9NQP4 KRT87P-202ENST00000534226 1464 ntBASIC19.89■□□□□ 0.77
PFDN4Q9NQP4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 AL162377.1-201ENST00000618844 1793 ntBASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 ZNRF2P3-201ENST00000424200 374 ntBASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN4Q9NQP4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 AC027612.3-201ENST00000413684 1047 ntBASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.87■□□□□ 0.77
PFDN4Q9NQP4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms