Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPS4Q9NQG7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HPS4Q9NQG7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 MIR4497-201ENST00000583208 89 ntBASIC21.02■□□□□ 0.96
HPS4Q9NQG7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPS4Q9NQG7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HPS4Q9NQG7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 AL356652.1-201ENST00000615962 565 ntBASIC21.01■□□□□ 0.95
HPS4Q9NQG7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HPS4Q9NQG7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21■□□□□ 0.95
HPS4Q9NQG7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21■□□□□ 0.95
HPS4Q9NQG7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HPS4Q9NQG7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21■□□□□ 0.95
HPS4Q9NQG7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21■□□□□ 0.95
HPS4Q9NQG7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
HPS4Q9NQG7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21■□□□□ 0.95
HPS4Q9NQG7 MTDHP1-201ENST00000605323 784 ntBASIC21■□□□□ 0.95
HPS4Q9NQG7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21■□□□□ 0.95
HPS4Q9NQG7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HPS4Q9NQG7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21■□□□□ 0.95
HPS4Q9NQG7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
HPS4Q9NQG7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21■□□□□ 0.95
HPS4Q9NQG7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HPS4Q9NQG7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 PGM5P4-201ENST00000421970 445 ntBASIC20.99■□□□□ 0.95
HPS4Q9NQG7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS4Q9NQG7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms