Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 MIPEPP3-201ENST00000412105 444 ntBASIC17.32■□□□□ 0.36
GCM1Q9NP62 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.32■□□□□ 0.36
GCM1Q9NP62 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
GCM1Q9NP62 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 BX276092.2-201ENST00000417668 665 ntBASIC17.31■□□□□ 0.36
GCM1Q9NP62 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 CYP2T3P-201ENST00000601990 817 ntBASIC17.31■□□□□ 0.36
GCM1Q9NP62 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GCM1Q9NP62 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.31■□□□□ 0.36
GCM1Q9NP62 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 AC027702.1-201ENST00000563810 1770 ntBASIC17.3■□□□□ 0.36
GCM1Q9NP62 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 AL355472.2-201ENST00000422958 438 ntBASIC17.3■□□□□ 0.36
GCM1Q9NP62 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.3■□□□□ 0.36
GCM1Q9NP62 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCM1Q9NP62 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 AC006128.1-201ENST00000624704 1661 ntBASIC17.29■□□□□ 0.36
GCM1Q9NP62 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 KRT18P68-201ENST00000392293 1000 ntBASIC17.29■□□□□ 0.36
GCM1Q9NP62 AL355802.2-201ENST00000402069 882 ntBASIC17.29■□□□□ 0.36
GCM1Q9NP62 AL138781.1-201ENST00000566567 1274 ntBASIC17.29■□□□□ 0.36
GCM1Q9NP62 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCM1Q9NP62 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 AC087633.2-202ENST00000565166 1439 ntBASIC17.29■□□□□ 0.36
GCM1Q9NP62 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GCM1Q9NP62 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms